High-Protein Baked Ziti Recipe for Muscle & Meal Prep

This high protein baked ziti is hearty, cheesy, and loaded with protein for a satisfying family dinner. Each serving delivers about 41 grams of protein thanks to lean ground meat, chicken or turkey sausage, and a cottage cheese–mozzarella filling.

A hot scoop of high protein baked ziti being lifted from the baking dish with lots of cheese.

Comfort Food Made Healthier

This baked ziti keeps the classic comfort-food flavors but boosts the protein without sacrificing creaminess or cheesiness. It’s filling, family-friendly, and simple enough for weeknights.

  • High-protein: About 41 grams of protein per serving from lean beef, sausage, cottage cheese, and mozzarella.
  • Family-friendly: Pasta, meat sauce, and melty cheese make it a hit even with picky eaters.
  • Easy: Quick to assemble and forgiving to prepare—great for busy evenings.
  • Great leftovers: Makes a generous batch and reheats well for lunches or dinners during the week.

Ingredients

Ingredients for high protein baked ziti in individual bowls with labels on a counter.

Full ingredient quantities and step-by-step instructions are in the recipe card below.

  • Pasta: 1 lb ziti (penne, rigatoni, cavatappi, or fusilli also work).
  • Lean beef + sausage: Lean ground beef (93% lean or higher) or ground turkey/chicken, plus Italian-style chicken or turkey sausage (raw with casings removed or fully cooked and chopped).
  • Aromatics: Onion, garlic, and fresh basil to flavor the sauce.
  • Marinara: Your favorite jarred sauce or a homemade tomato sauce.
  • Cheeses: Mozzarella and parmesan for the topping and cheese layer.
  • Cottage cheese: A high-protein substitute for ricotta—full-fat gives the creamiest result.
  • Seasonings: Italian seasoning, onion powder, garlic powder, salt, and pepper.

Variations

  • High-fiber or high-protein pasta: Use protein-enriched pasta, chickpea or red lentil pasta, or whole wheat for extra fiber.
  • Add vegetables: Stir in baby spinach or chopped kale, or sauté bell peppers with the onions for added veggies.
  • Use ricotta: Replace cottage cheese with equal parts ricotta if preferred.
  • Omit sausage: Skip the sausage and use more lean ground meat instead.

How To Make High Protein Baked Ziti

Ground beef and turkey sausage crumbles cooked in a large skillet with onions and garlic.
  1. Sauté: While the pasta cooks, sauté diced onion and minced garlic in olive oil over medium heat. Add ground beef and sausage and cook until no longer pink.
Seasonings being added by hand to a large skillet with cooked meat, water and tomato sauce.
  1. Simmer: Lower the heat, add marinara, water, chopped basil, and seasonings. Simmer for about 10 minutes, stirring occasionally, and adjust salt and pepper to taste.
Cottage cheese, mozzarella and parmesan mixed in a bowl.
  1. Make the cheese layer: In a bowl, combine cottage cheese, 1 cup mozzarella, parmesan, and seasonings; set aside. Reserve 1 cup mozzarella for the top.
Meat sauce with cooked ziti in a large skillet.
  1. Combine pasta and sauce: Drain the cooked pasta and stir it into the meat sauce until evenly coated.
Cheese mixture dollops being spread over a layer of ziti and meat sauce in a large white baking dish.
  1. Layer: In a deep 9×13″ baking dish, spread half the pasta and sauce. Dollop the cheese mixture over the pasta and smooth to cover as much as possible.
Shredded mozzarella cheese on top of high protein baked ziti ready for the oven.
  1. Top and bake: Add the remaining pasta, sprinkle with the reserved mozzarella, and bake at 400°F (200°C) for about 25 minutes, until the cheese is melted and golden brown.
High protein baked ziti in a casserole dish garnished with fresh basil leaves.

How To Store

  • Refrigerator: Cool completely, then store in an airtight container for up to 4 days.
  • Freezer: Freeze in a suitable container for up to 2 months. Reheat from frozen in a 350°F oven until heated through and bubbly (about an hour) or thaw overnight and reheat until hot.
High protein baked ziti in a large baking dish next to two portioned bowls topped with grated cheese and fresh basil.

jamie’s tips

Recipe Tips

  • Cook pasta al dente: Follow package directions so the pasta stays firm after baking.
  • Use a deep baking dish: Layers need depth—choose a deep 9×13″ or similar casserole dish for best results.
  • Full-fat cottage cheese: Whole-milk cottage cheese yields a creamier cheese layer; low-fat versions will be less rich.
  • Make-ahead option: Assemble ahead and refrigerate until ready to bake. If baking from chilled, lower oven to 375°F and bake 40–45 minutes until heated through.

More Healthier Pasta Recipes

Marry me chicken pasta in a pan garnished with basil.

Lightened Up Marry Me Chicken Pasta

A bowl full of cottage cheese pasta sauce on chickpea pasta and topped with parmesan cheese and black pepper in a white bowl.

The Best Creamy Cottage Cheese Pasta Sauce (High Protein)

Alfredo meatballs on a plate with pasta and garnished with parsley.

Alfredo Meatballs with Greek Yogurt Alfredo Sauce

A close up shot of chicken orzo bake garnished with lemons.

Chicken and Orzo Bake (Dump and Bake!)

If you’ve made and loved this High Protein Baked Ziti, please leave a star rating and a comment below!

A hot scoop of high protein baked ziti being lifted from the baking dish with lots of cheese.

High Protein Baked Ziti

A healthy twist on classic baked ziti with plenty of protein from lean meat, sausage, and a cottage cheese–mozzarella filling.

Jamie N, Registered Dietitian

Prep: 5 minutes
Cook: 35 minutes
Servings: 8

Ingredients 

  • 16 oz ziti
  • 1 tbsp olive oil
  • 1 lb lean ground beef, or ground turkey/chicken
  • 1/2 lb Italian ground turkey/chicken sausage, raw with casing removed or chopped fully cooked sausage
  • 1 yellow onion, medium, diced
  • 5 cloves garlic, minced
  • 5 cups marinara sauce
  • 1/2 cup water
  • 1/3 cup basil, chopped
  • 1/2 tsp Italian seasoning
  • 1/2 tsp onion powder
  • 1/2 tsp garlic powder
  • salt and black pepper, to taste

Cheese Layer

  • 2 cups shredded mozzarella, divided
  • 16 oz cottage cheese, full fat
  • 1/2 cup parmesan
  • 1/4 tsp Italian seasoning
  • 1/4 tsp garlic powder
  • pinch of black pepper

Instructions

  • Preheat oven to 400°F (200°C).
  • Bring a large pot of salted water to a boil and cook the pasta to al dente according to package directions. Drain and set aside.
  • In a large deep skillet, heat oil over medium. Add garlic and onion and cook 2 minutes until fragrant and softened.
  • Add ground meat and sausage, season with a pinch of salt and pepper, and cook until meat is just done.
  • Reduce heat, stir in marinara, water, basil, and seasonings. Simmer 10 minutes, then taste and adjust seasoning.
  • Meanwhile, combine cottage cheese, 1 cup mozzarella, parmesan, and seasonings in a bowl.
  • Mix the drained pasta into the meat sauce until evenly combined.
  • Spread half the pasta mixture in a deep 9×13″ baking dish. Dollop and spread the cheese layer, add the remaining pasta, and top with the remaining mozzarella.
  • Bake 25 minutes until the cheese is melted and golden. Let rest a few minutes before serving.

Nutrition

Serving: 1serving | Calories: 559kcal | Carbohydrates: 57g | Protein: 41g

Nutrition information is automatically calculated and should be used as an estimate.

Food photography by Marie-Catherine Dubé.